Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951887.1_cds_XP_016491791.1_82071
CDS Infomation

[gene=LOC107811384] [db_xref=GeneID:107811384] [protein=TMV resistance protein N-like isoform X2] [protein_id=XP_016491791.1] [location=join(50110..50744,51179..52274,52359..52784,52910..53875,53971..54150,54302..54313)] [gbkey=CDS]
Sequence

ATGACTCTGATCTCCAGCTGTTGGGACTTGTCACTTGTTGTGTCTCAGGTGTGCACTGCG
AAACAATTTTGCAGAGATTCTTACAATTATATTTACGCAAGCTCCTTTACCTTTATCTCC
ATTAGTACGTCCATGGAGAAACCTCTGGATCCAACACCTTCGTCTTCATCTTATGGGTGT
TCCTCAAATCAAGTATTCTTGAGTTTTAGAGCAGAAGACTCTTGTTGCATGTCTTTCACT
GATCACCTTTACACTGCCTTAGTTCAAGCTGGGTTTCAAACATTCAAACAGGGCACTGAC
ACAAGAAAAGAACAACTCCACAACGCAATCCGAGAGTCGAAAGTTTCGCTGATTGTCCTG
TCCGAAGGCTATGCCTTTTCTCAATCATGTCTTGATCAGCTCGATGTGATTCTGACATGT
AAGGAGAAATTGGATCGGGCAATTCTACCCGTCTTCTACTATGTGGATCCTTCTGATGTT
AGGAACAAGAAGGGAAGGATTGGGGAAGCATTAGCATTGCATGAACAAGAATTGAAATGG
GAAAGCAGTGGAAGGGAAAGGGTAGAAAGATGGAGGCAGGCACTTGCTAAAGTTGCTGAC
TTGGGGGGAATGGTCTTACACAATCAAGCTCGTGGGCATGAGTCGAAATTTATTCGAAAG
ATTGTTAATGTGGTCACAAATAGACTAAGTCGGACAGCTTTGTATGTTGCACCTTACCTA
ATCGGCATAGATCGCCGGGCTAAGCATATTAGCTTTTGGCTGCAAAATGGATCGGCTGAC
GTTGGCATATTGATTGTTTGTGGCATGGGCGGTATAGGGAAGACTACTCTGGCCAAGTTC
ATCTACAATTCAAACTTTCATGCTTTTGAAGGTAGCAGCTTTGTGCTTAACATAAGAGAA
ATTTCAAAGCAACCTAACGGTTTAGTTAAATTGCAAAAGCAAATACTTTCTGACATTCTA
AAAAGGACAAAGGAACGAGTATCATGTGTTGATGAAGGAATTGTTAAGATTTCAGATGCC
TTAAGTGGCAAAAGAGTCCTACTTGTTCTTGATGATGTGGATGATTCTGATCAACTAAAT
GCAGTATTGGGGATGAAAAGTTTATTTTACCCAGGAAGTAAAATCATCATAACAACCCGA
CATGAGCGAATTCTACATCCTCACCTAGTTGATAAGGTGTATACCGTTGAGACACTGAGC
ACGGACGAATCCTTAGAGCTCTTCAGTTGGCATGCCTTTGGAAAACCACATCCTGCGGAA
GGTTTTCTTGTGGGTTCAAATGAAGTAGTGAAACGGTGTGGAGGAATTCCACTTGCACTA
AGAGTTTTGGGTTCTTCCCTGGCAGGACAAAATTTAGATGTATGGCAAAGTACAATAAAG
AAGTTGCAAGTTGTTCCTAATAATCGGATTATTGAACTGCTCAAAATCAGTTATGAATCT
CTAGAAGATGATGATAGGAGTTTATTCCTTCATATTGCATGTTTCTTTCTCTGGGAGGAT
AAAGATTTTGCTGTCAAAATACTGGATAAATGTGAACTTTTCACTATAGTGGGGATCCAA
AACCTCATTGATAGAGATCTCTTGTCAATACTAAATGGTAGGCTCTTCATGCATCAACTG
ATTCAAGATCTGGGGAGAGAAATTGTTCGTCAAGAATCTGTTAAGGAGCCAGGGAGGCGT
AGTAGACTGTGGCGTCATGAAGAATCTTTGTACGTATTGAGAAACAAAACGGGAACTGAA
GCAATTGAAGGCATCATTCTCGACGGAAATATGTGTAAGGGGCATGGATCAACCAGGATA
ACATCTAATGAAAATTATGGCAAAAAAAGTAAAGTGGAAGAATTTATGAATAATTCTCAG
GAAGATCGACCAAAGCAGAATTGGATGTCCATTTTCTCTCGTCATATCATGGGCACAAGG
GAAGTTCCAAATGAGGATTTGGAAACTGACTCATTCACAAACATGCTCAAGTTGAAATTT
CTGTTGCTTAGCAATATACAACTTTCTGGATGTTACAGGAAATTTCCCAAGAAATTAAGA
TGGTTGTTTTGGCGTTATCTCCAGTTAGAATCCCTACCAAGCGACTTTCCGATGGGAAAA
CTTGTTGCTATAGACCTTTGTTACAGCAGCTTGAAACAACTTTGGACAGCACCAAAGTTA
CTCAGATGGTTAAAGTTTCTCAATCTCAGCCACTCTTATCAGCTTAGTAGAACTCCTGAT
TTTTCATTACTTCCCAACCTTGAACAATTAATCCTCGAATATTGTACAAGTCTAACTGAG
GTGGATGACACTATTGGATATCTGGAAGGACTCACTGTTTTAAGCCTTAATGGTTGTATA
AACTTGAGGAGCATTTCAGAAAGTATTTGCATGTTAACACATCTTGAGACCCTTGATATT
TCTGGTTGCTCAAATCTTGAATATGTCGCCCTGAAGCTTGAAAAGTCGGATTTTCCAAGT
GAGCTTTCAGATGAAAGTGGAAGAAACCAAATAGATAATACCAAGCTAGTAAGACCATGG
CATACAATCTTGTGGTCTTTGCTGAGGAAGGAGAAAGTATGTCATAGAGTTTCACCAATC
AGTTTTCCGACTTCTCTAGTTACTCTAAGACTTTCTGACTGCAATCTGGGTGATAATGCA
TTTCTCCATGTTGATTTTAGTAAGCTCAATTTGCTGAAAGAATTGAGTTTGAGCCGAAAT
CCACTTTGCCATCCCCCAGAGAGCATTAGATATCTTAGCAGGCTCGAAAACCTTTCACTA
AATTCATGTACAAGGCTAAAATCAGTACTCGAGCTGCCAAATGGTGTTGAGATTGTTGAT
GCAACTGACTGTATATCCTTGGAGAAAGTATCAGGCGCACCTAGCTCATGCAGCATTCTT
TACATAAATTGTGCTAATCTGGTTGAGATGAACGCTAATTTCAAGTTAGAACATCTTGAA
AATGTCAATGCAGAAACTCTCGGCTATTTGGGTCTGTCAAACTTGGAGTTGATTAGAAAT
GTTACTTTTAGATTAAGATTTGACATTCAGAAATTGCATGCTGATGAAATGGAATTTCCG
GAATTTGTCCAAAATGACATGGCAAAATTACAATCTCTCCCACCTAAGAAGCTTCCCGCT
CAGGGATATTACTGCAATGGCGTCTTCTCCACATTCCTATCGGGTGAACACGTGCCAAGT
TGCTTTGACACGAAGTTGAGTGAGCCTTTCTGTTCATCGTTCATCGTGCCTACTCCTGAT
AATCATAGAATTCGAGGCTTGAGTTTTTGCTTGGTGTATACATGCTTGGAGAGTGAAGAA
ATGGTGATGTTGTAG

Peptide Sequence

PEP ID

XP_016491791.1
PEP Infomation

PREDICTED: TMV resistance protein N-like isoform X2 [Nicotiana tabacum]
Sequence

MTLISSCWDLSLVVSQVCTAKQFCRDSYNYIYASSFTFISISTSMEKPLDPTPSSSSYGC
SSNQVFLSFRAEDSCCMSFTDHLYTALVQAGFQTFKQGTDTRKEQLHNAIRESKVSLIVL
SEGYAFSQSCLDQLDVILTCKEKLDRAILPVFYYVDPSDVRNKKGRIGEALALHEQELKW
ESSGRERVERWRQALAKVADLGGMVLHNQARGHESKFIRKIVNVVTNRLSRTALYVAPYL
IGIDRRAKHISFWLQNGSADVGILIVCGMGGIGKTTLAKFIYNSNFHAFEGSSFVLNIRE
ISKQPNGLVKLQKQILSDILKRTKERVSCVDEGIVKISDALSGKRVLLVLDDVDDSDQLN
AVLGMKSLFYPGSKIIITTRHERILHPHLVDKVYTVETLSTDESLELFSWHAFGKPHPAE
GFLVGSNEVVKRCGGIPLALRVLGSSLAGQNLDVWQSTIKKLQVVPNNRIIELLKISYES
LEDDDRSLFLHIACFFLWEDKDFAVKILDKCELFTIVGIQNLIDRDLLSILNGRLFMHQL
IQDLGREIVRQESVKEPGRRSRLWRHEESLYVLRNKTGTEAIEGIILDGNMCKGHGSTRI
TSNENYGKKSKVEEFMNNSQEDRPKQNWMSIFSRHIMGTREVPNEDLETDSFTNMLKLKF
LLLSNIQLSGCYRKFPKKLRWLFWRYLQLESLPSDFPMGKLVAIDLCYSSLKQLWTAPKL
LRWLKFLNLSHSYQLSRTPDFSLLPNLEQLILEYCTSLTEVDDTIGYLEGLTVLSLNGCI
NLRSISESICMLTHLETLDISGCSNLEYVALKLEKSDFPSELSDESGRNQIDNTKLVRPW
HTILWSLLRKEKVCHRVSPISFPTSLVTLRLSDCNLGDNAFLHVDFSKLNLLKELSLSRN
PLCHPPESIRYLSRLENLSLNSCTRLKSVLELPNGVEIVDATDCISLEKVSGAPSSCSIL
YINCANLVEMNANFKLEHLENVNAETLGYLGLSNLELIRNVTFRLRFDIQKLHADEMEFP
EFVQNDMAKLQSLPPKKLPAQGYYCNGVFSTFLSGEHVPSCFDTKLSEPFCSSFIVPTPD
NHRIRGLSFCLVYTCLESEEMVML

Transcript Sequence

Gene sequence data has not been registered.